densitymap
Module: tractogram/densitymap
Compute density maps from tractograms
Keywords : Diffusion MRI, Tractogram, Density Map
Inputs
| Type | Description | Mandatory | Pattern | |
|---|---|---|---|---|
| meta | map | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] | true | |
| tractogram | file | Tractogram file for density map computation | *.trk |
Outputs
| Type | Description | Pattern | |
|---|---|---|---|
| meta | map | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] | |
| density_map | file | Computed density map | *.nii.gz |
| versions | file | File containing software versions | versions.yml |
Tools
| Description | DOI | |
|---|---|---|
| scilpy | The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox. |
Authors
Maintainers
Last updated : 2025-07-15