readbids

Module: io/readbids

Module reading bids specification for an input folder.

Inputs

	Type	Description	Mandatory	Pattern
bids_folder	directory	Folder containing bids file		*
fs_folder	directory	Folder containing fs file		*
bids_ignore	file	bids_ignore file		*.{bids_ignore}

Arguments

	Type	Description	Choices	Default
readout	float	Readout time to add in metadata.		0.062
clean_bids	boolean	If set to true, will remove participants with missing files from the final BIDS layout.		False

Outputs

	Type	Description	Pattern
versions	file	File containing software versions	versions.yml
bidsstructure	file	json file containing tractoflow bids structure	*.{json}

Tools

	Description	Homepage	DOI
scilpy	The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox.	https://github.com/scilus/scilpy.git

Authors

@harshana2011