Module: denoising/nlmeans
denoise a dataset with the Non Local Means algorithm
Keywords : nifti, denoising, nlmeans, scilpy
| Type | Description | Mandatory | Pattern |
|---|
| meta | map | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] | true | |
| image | file | Nifti image file to denoise | true | *.{nii,nii.gz} |
| mask | file | Nifti image file used to mask the input image | false | *.{nii,nii.gz} |
Outputs
| Type | Description | Pattern |
|---|
| meta | map | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] | |
| image | file | Denoised Nifti image file | *_denoised.{nii,nii.gz} |
| versions | file | File containing software versions | versions.yml |
| Type | Description | Default | Choices |
|---|
| ncoils | int | Number of coils used for the acquisition | 1 | |
| Description | DOI |
|---|
| scilpy | The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox. | |
Authors
scilus
Last updated : 2025-07-15
