centroid

Module: bundle/centroid

Compute bundles’ centroids or resample existing centroids.

Inputs

	Type	Description	Mandatory	Pattern
meta	map	Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]	true
bundles	file	List of bundles to compute centroids for. If this input is supplied, the module will compute centroids.	true	*.trk

Arguments

	Type	Description	Choices	Default
nb_points	int	Number of points to resample the centroids to.		5

Outputs

	Type	Description	Pattern
meta	map	Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
versions	file	File containing software versions	versions.yml
centroids	file	Computed centroids.	*.trk

Tools

	Description	Homepage	DOI
scilpy	The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox.	https://github.com/scilus/scilpy.git

Authors

@gagnonanthony

Maintainers

@gagnonanthony