convert
Module: image/convert
Small utility module to perform data type conversion on images. The new datatype has to be specified using the task.ext.datatype parameter, otherwise, the module will fail.
Keywords : image, convert, datatype
Inputs
| Type | Description | Mandatory | Pattern | |
|---|---|---|---|---|
| meta | map | Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ] | true | |
| image | file | Image to convert. | *.nii.gz |
Outputs
| Type | Description | Pattern | |
|---|---|---|---|
| meta | map | Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ] | |
| image | file | Image converted into the specified datatype. | *_converted.nii.gz |
| versions | file | File containing software versions | versions.yml |
Tools
| Description | DOI | |
|---|---|---|
| MRtrix3 | MRtrix3 is a software package for various types of diffusion imaging data, including diffusion-weighted, diffusion-tensor, and q-ball imaging. |
Authors
Maintainers
Last updated : 2025-07-15