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nf-neuro

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Modules & Subworkflows in nf-neuro

nf-neuro pipelines are built using two key components:

🧩 Modules

  • Single, reusable Nextflow processes (e.g., brain extraction, filtering).
  • Found in /modules/nf-neuro/.
  • Focused on one specific task.

    • 🔗 Subworkflows

  • Chains of modules forming higher-level workflows.
  • Found in /subworkflows/.
  • Define how modules connect to achieve a broader goal (e.g., preprocessing pipeline).

    • Why?

  • 🔄 Reusability
  • 🧼 Clean, modular code
  • 🚀 Easier maintenance & scaling

    • 👇 Let’s explore full API details for modules and subworkflows.