Module: tractogram/removeinvalid

Remove invalid streamlines from a single or multiple tractograms/bundles.

Inputs

	Type	Description	Pattern
meta	map	Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
tractograms	file	Tractogram or list of tractograms to register	*.{trk,tck}

Outputs

	Type	Description	Pattern
meta	map	Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
versions	file	File containing software versions	versions.yml
tractogram	file	Filtered tractogram(s).	*.{trk,tck}

Tools

	Description	Homepage	DOI
scilpy	The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox.	https://github.com/scilus/scilpy.git

Keywords

Invalid
Tractograms
Streamlines

Authors

@gagnonanthony

Maintainers

@gagnonanthony