Module: tractogram/densitymap

Compute density maps from tractograms

Inputs

	Type	Description	Pattern
meta	map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
tractogram	file	Tractogram file for density map computation	*.trk

Outputs

	Type	Description	Pattern
meta	map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
density_map	file	Computed density map	*.nii.gz
versions	file	File containing software versions	versions.yml

Tools

	Description	Homepage	DOI
scilpy	The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox.	https://github.com/scilus/scilpy.git

Keywords

Diffusion MRI
Tractogram
Density Map

Authors

@GuillaumeTh

Maintainers

@GuillaumeTh