Module: image/powderaverage
Calculate the powder average of a 4D diffusion volume.
Inputs
| Type | Description | Pattern | |
|---|---|---|---|
| meta | map | Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ] | |
| dwi | file | Nifti DWI volume to compute the powder average on. | *.nii.gz |
| bval | file | b-values file. | *.bval |
| mask | file | Binary mask to apply on the DWI volume. | *.nii.gz |
Outputs
| Type | Description | Pattern | |
|---|---|---|---|
| meta | map | Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ] | |
| pwd_avg | file | Powder averaged DWI volume. | *.nii.gz |
| versions | file | File containing software versions | versions.yml |
Tools
| Description | Homepage | DOI | |
|---|---|---|---|
| scilpy | The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox. | https://github.com/scilus/scilpy.git |
Keywords
| DWI |
| Powder Average |
| BET |
Authors
@gagnonanthony
Maintainers
@gagnonanthony