Module: io/nii2dcm

Convert NIfTI files to DICOM format.

Inputs

	Type	Description	Pattern
meta	map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
niftis	list	NIfTI files to be converted to DICOM format	*.{nii,nii.gz}
dicom	file	Reference DICOM file (optional)	*.dcm

Outputs

	Type	Description	Pattern
dicom_directory	directory	Directory containing the DICOM files	DICOM/
versions	file	File containing software versions	versions.yml

Tools

	Description	Homepage	DOI
MRtrix3	Toolbox for image processing, analysis and visualisation of dMRI.	https://www.mrtrix.org/
nii2dcm	A tool to convert NIfTI files to DICOM format.	https://github.com/Onset-lab/nii2dcm

Keywords

NIfTI
DICOM
Conversion

Authors

@GuillaumeTh