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Welcome
Create your pipeline
- Setup your computer
- Tutorial
How-to
- Nextflow
  - Top-5 Operators
  - Custom Subworkflows
- VSCode
  - Data in devcontainers
  - Nextflow support
Advanced Tutorials
Contribute to nf-neuro
- Setup your computer
- Create your module
- Create your subworkflow
  - Create your subworkflow
API Documentation
- Categories
- modules
  - betcrop
    
    antsbet
    fslbetcrop
    synthbet
  - bundle
    
    centroid
    coloring
    fixelafd
    labelmap
    recognize
    stats
    uniformize
  - connectivity
    
    afdfixel
    decompose
    visualize
  - denoising
    
    mppca
    nlmeans
  - image
    
    applymask
    burnvoxels
    convert
    cropvolume
    powderaverage
    resample
  - io
    
    nii2dcm
    readbids
  - mqc
    
    gif
  - preproc
    
    eddy
    gibbs
    n4
    normalize
    topup
  - reconst
    
    diffusivitypriors
    dtimetrics
    fodf
    freewater
    frf
    ihmt
    meanfrf
    noddi
    shmetrics
    shsignal
  - registration
    
    anattodwi
    ants
    antsapplytransforms
    convert
    easyreg
    synthregistration
    tractogram
  - segmentation
    
    fastseg
    fastsurfer
    freesurferseg
    fsreconall
    synthseg
  - stats
    
    metricsinroi
  - tracking
    
    localtracking
    pfttracking
  - tractogram
    
    densitymap
    removeinvalid
    resample
  - utils
    
    extractb0
- subworkflows

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On this page

Top-5 Operators

Have fun with .map, .join, .groupTuple.